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Risk analysis and critical infrastructure protection are key issues in a changing environment threatened by asymmetrical proliferation. Starting from the NATO framework, a comparison is drawn with some EU approaches in critical infrastructure protection policy. Synergies could lead to improvements for better cooperation and interoperability between EU and NATO operations. The corollary will lead to the reinforcement of homeland security, hence national approach in its present context is analyzed. Finally recommendations are formulated to reach an integrated approach between national and NATO institutions in relation to risk analysis and protection of our critical infrastructure.